HL_8PEG_030

3D structure

PDB id

8PEG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (queueing 70S non-rotated closed PRE state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CUUAUG

Length

6 nucleotides

Bulged bases

8PEG|1|7|A|1175

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8PEG_030 not in the Motif Atlas

Geometric match to HL_5TBW_022

Geometric discrepancy: 0.28

The information below is about HL_5TBW_022

Detailed Annotation

Externally structured

Broad Annotation

Externally structured

Motif group

HL_96426.1

Basepair signature

cWW-F

Number of instances in this motif group

4

Unit IDs

8PEG|1|7|C|1172
8PEG|1|7|U|1173
8PEG|1|7|U|1174
8PEG|1|7|A|1175
8PEG|1|7|U|1176
8PEG|1|7|G|1177

Current chains

Chain 7

23S ribosomal RNA

Nearby chains