HL_8PEG_055

3D structure

PDB id

8PEG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (queueing 70S non-rotated closed PRE state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GGUCGGACAUC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8PEG_055 not in the Motif Atlas

Homologous match to HL_5J7L_188

Geometric discrepancy: 0.0887

The information below is about HL_5J7L_188

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_11805.4

Basepair signature

cWW-F-F-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

8PEG|1|7|G|2303
8PEG|1|7|G|2304
8PEG|1|7|U|2305
8PEG|1|7|C|2306
8PEG|1|7|G|2307
8PEG|1|7|G|2308
8PEG|1|7|A|2309
8PEG|1|7|C|2310
8PEG|1|7|A|2311
8PEG|1|7|U|2312
8PEG|1|7|C|2313

Current chains

Chain 7

23S ribosomal RNA

Nearby chains

Chain e

50S ribosomal protein L5