HL_8PEG_117

3D structure

PDB id

8PEG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (queueing 70S non-rotated closed PRE state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GUCGGACAU

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8PEG_117 not in the Motif Atlas

Homologous match to HL_5J7L_219

Geometric discrepancy: 0.0971

The information below is about HL_5J7L_219

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50860.2

Basepair signature

cWW-F-cWH-F-F-F-F

Number of instances in this motif group

6

Unit IDs

8PEG|1|7|G|2304
8PEG|1|7|U|2305
8PEG|1|7|C|2306
8PEG|1|7|G|2307
8PEG|1|7|G|2308
8PEG|1|7|A|2309
8PEG|1|7|C|2310
8PEG|1|7|A|2311
8PEG|1|7|U|2312

Current chains

Chain 7

23S ribosomal RNA

Nearby chains

Chain e

50S ribosomal protein L5