HL_8PFR_057
3D structure
- PDB id
- 8PFR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mouse RPL39L integrated into the yeast 60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.15 Å
Loop
- Sequence
- UUCAGUGUG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8PFR_057 not in the Motif Atlas
- Homologous match to HL_5TBW_058
- Geometric discrepancy: 0.0802
- The information below is about HL_5TBW_058
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_34636.1
- Basepair signature
- cWW-cWW-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
8PFR|1|A|U|2724
8PFR|1|A|U|2725
8PFR|1|A|C|2726
8PFR|1|A|A|2727
8PFR|1|A|G|2728
8PFR|1|A|U|2729
8PFR|1|A|G|2730
8PFR|1|A|U|2731
8PFR|1|A|G|2732
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain QP
- 60S ribosomal protein L18-A
- Chain QT
- 60S ribosomal protein L21-A
- Chain RA
- 60S ribosomal protein L28
- Chain RQ
- 60S ribosomal protein L42-A
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