HL_8PJ5_019
3D structure
- PDB id
- 8PJ5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of human 48S translation initiation complex after eIF2 release prior 60S subunit joining (48S-5)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UAUUUUGUUGGUUUUCG
- Length
- 17 nucleotides
- Bulged bases
- 8PJ5|1|A|G|891, 8PJ5|1|A|U|896
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8PJ5_019 not in the Motif Atlas
- Geometric match to HL_8C3A_039
- Geometric discrepancy: 0.3798
- The information below is about HL_8C3A_039
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_71121.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 24
Unit IDs
8PJ5|1|A|U|885
8PJ5|1|A|A|886
8PJ5|1|A|U|887
8PJ5|1|A|U|888
8PJ5|1|A|U|889
8PJ5|1|A|U|890
8PJ5|1|A|G|891
8PJ5|1|A|U|892
8PJ5|1|A|U|893
8PJ5|1|A|G|894
8PJ5|1|A|G|895
8PJ5|1|A|U|896
8PJ5|1|A|U|897
8PJ5|1|A|U|898
8PJ5|1|A|U|899
8PJ5|1|A|C|900
8PJ5|1|A|G|901
Current chains
- Chain A
- 18S rRNA
Nearby chains
- Chain S
- 40S ribosomal protein S6
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