HL_8PK0_015
3D structure
- PDB id
- 8PK0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human mitoribosomal large subunit assembly intermediate 1 with GTPBP10-GTPBP7
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.03 Å
Loop
- Sequence
- GCGUUCAAGC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8PK0_015 not in the Motif Atlas
- Homologous match to HL_5J7L_212
- Geometric discrepancy: 0.2438
- The information below is about HL_5J7L_212
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.5
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
8PK0|1|A|G|2201
8PK0|1|A|C|2202
8PK0|1|A|G|2203
8PK0|1|A|U|2204
8PK0|1|A|U|2205
8PK0|1|A|C|2206
8PK0|1|A|A|2207
8PK0|1|A|A|2208
8PK0|1|A|G|2209
8PK0|1|A|C|2210
Current chains
- Chain A
- 16S rRNA + pre-H68-71 segment
Nearby chains
- Chain J
- 39S ribosomal protein L11, mitochondrial
- Chain l
- 39S ribosomal protein L54, mitochondrial
- Chain t
- GTP-binding protein 10
Coloring options: