HL_8PKL_024

3D structure

PDB id

8PKL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (leading 70S non-rotated closed PRE state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.09 Å

Loop

Sequence

UUUAGG

Length

6 nucleotides

Bulged bases

8PKL|1|7|U|827, 8PKL|1|7|G|830

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8PKL_024 not in the Motif Atlas

Homologous match to HL_4WF9_025

Geometric discrepancy: 0.0934

The information below is about HL_4WF9_025

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_27530.1

Basepair signature

cWW-F-F

Number of instances in this motif group

10

Unit IDs

8PKL|1|7|U|826
8PKL|1|7|U|827
8PKL|1|7|U|828
8PKL|1|7|A|829
8PKL|1|7|G|830
8PKL|1|7|G|831

Current chains

Chain 7

23S ribosomal RNA

Nearby chains

Chain o

50S ribosomal protein L15