HL_8PKL_038

3D structure

PDB id

8PKL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (leading 70S non-rotated closed PRE state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.09 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

8PKL|1|7|A|1535, 8PKL|1|7|C|1536

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8PKL_038 not in the Motif Atlas

Geometric match to HL_5U3G_001

Geometric discrepancy: 0.2028

The information below is about HL_5U3G_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.7

Basepair signature

cWW-F

Number of instances in this motif group

22

Unit IDs

8PKL|1|7|C|1533
8PKL|1|7|U|1534
8PKL|1|7|A|1535
8PKL|1|7|C|1536
8PKL|1|7|G|1537
8PKL|1|7|G|1538

Current chains

Chain 7

23S ribosomal RNA

Nearby chains