HL_8PKL_074

3D structure

PDB id

8PKL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (leading 70S non-rotated closed PRE state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.09 Å

Loop

Sequence

GGAAAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8PKL_074 not in the Motif Atlas

Homologous match to HL_4LFB_003

Geometric discrepancy: 0.169

The information below is about HL_4LFB_003

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

397

Unit IDs

8PKL|1|A|G|158
8PKL|1|A|G|159
8PKL|1|A|A|160
8PKL|1|A|A|161
8PKL|1|A|A|162
8PKL|1|A|C|163

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain T

Small ribosomal subunit protein bS20

Chain s

50S ribosomal protein L19