HL_8PNN_067
3D structure
- PDB id
- 8PNN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S yeast ribosome in complex with Bromolissoclimide
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- GUAUACGAC
- Length
- 9 nucleotides
- Bulged bases
- 8PNN|1|1|U|3304
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8PNN_067 not in the Motif Atlas
- Homologous match to HL_8CRE_069
- Geometric discrepancy: 0.0744
- The information below is about HL_8CRE_069
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_64690.6
- Basepair signature
- cWW-cSW-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
8PNN|1|1|G|3303
8PNN|1|1|U|3304
8PNN|1|1|A|3305
8PNN|1|1|U|3306
8PNN|1|1|A|3307
8PNN|1|1|C|3308
8PNN|1|1|G|3309
8PNN|1|1|A|3310
8PNN|1|1|C|3311
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain AE
- 60S ribosomal protein L31-A
- Chain k
- 60S ribosomal protein L3
- Chain x
- 60S ribosomal protein L17-A
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