HL_8PNN_098
3D structure
- PDB id
- 8PNN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S yeast ribosome in complex with Bromolissoclimide
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- GACUCAACAC
- Length
- 10 nucleotides
- Bulged bases
- 8PNN|1|A|A|1196
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8PNN_098 not in the Motif Atlas
- Homologous match to HL_8P9A_215
- Geometric discrepancy: 0.0955
- The information below is about HL_8P9A_215
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_97521.1
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
8PNN|1|A|G|1188
8PNN|1|A|A|1189
8PNN|1|A|C|1190
8PNN|1|A|U|1191
8PNN|1|A|C|1192
8PNN|1|A|A|1193
8PNN|1|A|A|1194
8PNN|1|A|C|1195
8PNN|1|A|A|1196
8PNN|1|A|C|1197
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain R
- 40S ribosomal protein S16-A
- Chain V
- Small ribosomal subunit protein uS10
- Chain e
- Small ribosomal subunit protein uS14A
- Chain i
- Suppressor protein STM1
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