HL_8PNN_183
3D structure
- PDB id
- 8PNN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S yeast ribosome in complex with Bromolissoclimide
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- GUAUUC
- Length
- 6 nucleotides
- Bulged bases
- 8PNN|1|AT|U|125
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8PNN_183 not in the Motif Atlas
- Homologous match to HL_8P9A_189
- Geometric discrepancy: 0.0791
- The information below is about HL_8P9A_189
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_86883.1
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
8PNN|1|AT|G|124
8PNN|1|AT|U|125
8PNN|1|AT|A|126
8PNN|1|AT|U|127
8PNN|1|AT|U|128
8PNN|1|AT|C|129
Current chains
- Chain AT
- 5.8S ribosomal RNA
Nearby chains
- Chain AR
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: