Motif HL_79745.1 Version HL_79745.1 of this group appears in releases 4.0 to 4.6
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 1-5 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_8P9A_189 | 8P9A | 0.0000 | 1 | AT | 5.8S rRNA | G | 124 | A | 126 | U | 127 | U | 128 | C | 129 | cWW |
| 2 | HL_8OI5_074 | 8OI5 | 0.1329 | 1 | 4 | 5.8S rRNA | G | 124 | A | 126 | U | 127 | U | 128 | C | 129 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUAUUC | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UAUU | 2 |
Release history
| Release | 4.0 | 4.1 | 4.2 | 4.3 | 4.4 | 4.5 | 4.6 |
|---|---|---|---|---|---|---|---|
| Date | 2025-08-13 | 2025-09-10 | 2025-10-08 | 2025-11-05 | 2025-12-03 | 2025-12-31 | 2026-01-28 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-F-F-F
- Heat map statistics
- Min 0.13 | Avg 0.07 | Max 0.13
Coloring options: