HL_8PNN_186
3D structure
- PDB id
- 8PNN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S yeast ribosome in complex with Bromolissoclimide
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- GUAAUUC
- Length
- 7 nucleotides
- Bulged bases
- 8PNN|1|sR|U|159
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8PNN_186 not in the Motif Atlas
- Homologous match to HL_8P9A_192
- Geometric discrepancy: 0.0778
- The information below is about HL_8P9A_192
- Detailed Annotation
- GNRA related
- Broad Annotation
- GNRA related
- Motif group
- HL_34789.3
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 397
Unit IDs
8PNN|1|sR|G|154
8PNN|1|sR|U|155
8PNN|1|sR|A|156
8PNN|1|sR|A|157
8PNN|1|sR|U|158
8PNN|1|sR|U|159
8PNN|1|sR|C|160
Current chains
- Chain sR
- 16S ribosomal RNA
Nearby chains
- Chain d4
- 40S ribosomal protein S24-A
- Chain s6
- 40S ribosomal protein S6-A
Coloring options: