HL_8PNN_204
3D structure
- PDB id
- 8PNN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S yeast ribosome in complex with Bromolissoclimide
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- GAUCAGAUACC
- Length
- 11 nucleotides
- Bulged bases
- 8PNN|1|sR|U|1004
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8PNN_204 not in the Motif Atlas
- Homologous match to HL_8P9A_211
- Geometric discrepancy: 0.0524
- The information below is about HL_8P9A_211
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.5
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
8PNN|1|sR|G|997
8PNN|1|sR|A|998
8PNN|1|sR|U|999
8PNN|1|sR|C|1000
8PNN|1|sR|A|1001
8PNN|1|sR|G|1002
8PNN|1|sR|A|1003
8PNN|1|sR|U|1004
8PNN|1|sR|A|1005
8PNN|1|sR|C|1006
8PNN|1|sR|C|1007
Current chains
- Chain sR
- 16S ribosomal RNA
Nearby chains
- Chain AR
- Large subunit ribosomal RNA; LSU rRNA
- Chain c4
- 40S ribosomal protein S14-B
- Chain d6
- Small ribosomal subunit protein eS26B
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