HL_8PV3_052
3D structure
- PDB id
- 8PV3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Chaetomium thermophilum pre-60S State 9 - pre-5S rotation - immature H68/H69 - composite structure
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- CUUCGCG
- Length
- 7 nucleotides
- Bulged bases
- 8PV3|1|C1|U|2529, 8PV3|1|C1|C|2532
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8PV3_052 not in the Motif Atlas
- Geometric match to HL_6JQ6_004
- Geometric discrepancy: 0.2479
- The information below is about HL_6JQ6_004
- Detailed Annotation
- UNCG
- Broad Annotation
- No text annotation
- Motif group
- HL_61337.3
- Basepair signature
- cWW-tSW-F
- Number of instances in this motif group
- 62
Unit IDs
8PV3|1|C1|C|2527
8PV3|1|C1|U|2528
8PV3|1|C1|U|2529
8PV3|1|C1|C|2530
8PV3|1|C1|G|2531
8PV3|1|C1|C|2532
8PV3|1|C1|G|2533
Current chains
- Chain C1
- 26S rRNA
Nearby chains
- Chain CJ
- Pescadillo homolog
- Chain CM
- 60S ribosomal protein l7-like protein
- Chain Ce
- Ribosome biogenesis protein NOP53
- Chain LZ
- 60S ribosomal protein L27
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