HL_8PV4_024

3D structure

PDB id

8PV4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chaetomium thermophilum pre-60S State 2 - pre-5S rotation with Rix1 complex - composite structure

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GCGAAUGAAC

Length

10 nucleotides

Bulged bases

8PV4|1|C1|G|983

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8PV4|1|C1|G|981
8PV4|1|C1|C|982
8PV4|1|C1|G|983
8PV4|1|C1|A|984
8PV4|1|C1|A|985
8PV4|1|C1|U|986
8PV4|1|C1|G|987
8PV4|1|C1|A|1030
8PV4|1|C1|A|1031
8PV4|1|C1|C|1032

Current chains

Chain C1

26S rRNA

Nearby chains

Chain CL

Putative GTP binding protein

Chain Cz

rRNA-processing protein

Chain LS

60S ribosomal protein L20