3D structure

PDB id
8Q4F (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of arbekacin bound Escherichia coli 70S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
3.1 Å

Loop

Sequence
GGC
Length
3 nucleotides
Bulged bases
None detected
QA status
Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_8Q4F_005 not in the Motif Atlas
Geometric match to HL_8C3A_022
Geometric discrepancy: 0.2331
The information below is about HL_8C3A_022
Detailed Annotation
Externally structured
Broad Annotation
Externally structured
Motif group
HL_96426.1
Basepair signature
cWW-F
Number of instances in this motif group
4

Unit IDs

8Q4F|1|A|G|203
8Q4F|1|A|G|204
8Q4F|1|A|C|214

Current chains

Chain A
16S rRNA

Nearby chains

No other chains within 10Å

Coloring options:


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