HL_8Q4F_079
3D structure
- PDB id
- 8Q4F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of arbekacin bound Escherichia coli 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GCGCAAGC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8Q4F_079 not in the Motif Atlas
- Geometric match to HL_3RG5_006
- Geometric discrepancy: 0.3337
- The information below is about HL_3RG5_006
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- tRNA anticodon loop
- Motif group
- HL_04259.3
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
8Q4F|1|a|G|1867
8Q4F|1|a|C|1868
8Q4F|1|a|G|1869
8Q4F|1|a|C|1870
8Q4F|1|a|A|1871
8Q4F|1|a|A|1872
8Q4F|1|a|G|1873
8Q4F|1|a|C|1874
Current chains
- Chain a
- 23S rRNA
Nearby chains
No other chains within 10ÅColoring options: