HL_8Q5I_026
3D structure
- PDB id
- 8Q5I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with cephaeline
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.45 Å
Loop
- Sequence
- CUGUUUUGACG
- Length
- 11 nucleotides
- Bulged bases
- 8Q5I|1|1|G|1345, 8Q5I|1|1|U|1346, 8Q5I|1|1|U|1348, 8Q5I|1|1|U|1349, 8Q5I|1|1|G|1350, 8Q5I|1|1|C|1352
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8Q5I_026 not in the Motif Atlas
- Homologous match to HL_8C3A_029
- Geometric discrepancy: 0.1442
- The information below is about HL_8C3A_029
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_13577.1
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
8Q5I|1|1|C|1343
8Q5I|1|1|U|1344
8Q5I|1|1|G|1345
8Q5I|1|1|U|1346
8Q5I|1|1|U|1347
8Q5I|1|1|U|1348
8Q5I|1|1|U|1349
8Q5I|1|1|G|1350
8Q5I|1|1|A|1351
8Q5I|1|1|C|1352
8Q5I|1|1|G|1353
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain AF
- 60S ribosomal protein L32
- Chain l
- 60S ribosomal protein L4-B
- Chain n
- 60S ribosomal protein L6
- Chain o
- 60S ribosomal protein L7-A
- Chain y
- 60S ribosomal protein L18-A
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