HL_8Q5I_056
3D structure
- PDB id
- 8Q5I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with cephaeline
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.45 Å
Loop
- Sequence
- UUCAGUGUG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8Q5I_056 not in the Motif Atlas
- Homologous match to HL_8C3A_059
- Geometric discrepancy: 0.055
- The information below is about HL_8C3A_059
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_34636.1
- Basepair signature
- cWW-cWW-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
8Q5I|1|1|U|2696
8Q5I|1|1|U|2697
8Q5I|1|1|C|2698
8Q5I|1|1|A|2699
8Q5I|1|1|G|2700
8Q5I|1|1|U|2701
8Q5I|1|1|G|2702
8Q5I|1|1|U|2703
8Q5I|1|1|G|2704
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain 2
- 60S ribosomal protein L21-A
- Chain AB
- 60S ribosomal protein L28
- Chain AC
- 60S ribosomal protein L29
- Chain AP
- 60S ribosomal protein L42-B
- Chain y
- 60S ribosomal protein L18-A
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