HL_8Q5I_082
3D structure
- PDB id
- 8Q5I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with cephaeline
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.45 Å
Loop
- Sequence
- UAAGGG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8Q5I_082 not in the Motif Atlas
- Homologous match to HL_4V88_194
- Geometric discrepancy: 0.0897
- The information below is about HL_4V88_194
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50142.3
- Basepair signature
- cWW-cWW-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
8Q5I|1|A|U|366
8Q5I|1|A|A|367
8Q5I|1|A|A|368
8Q5I|1|A|G|369
8Q5I|1|A|G|370
8Q5I|1|A|G|371
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain D
- Ribosomal protein S5
- Chain K
- Ribosomal protein S4
- Chain M
- 40S ribosomal protein S11A
- Chain X
- 40S ribosomal protein S22-A
- Chain Y
- Ribosomal protein S23 (S12)
Coloring options: