HL_8QBT_001
3D structure
- PDB id
- 8QBT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli ApdP-stalled ribosomal complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- CAGCUUGGUAG
- Length
- 11 nucleotides
- Bulged bases
- 8QBT|1|5|G|19
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8QBT_001 not in the Motif Atlas
- Homologous match to HL_6PMO_003
- Geometric discrepancy: 0.1132
- The information below is about HL_6PMO_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8QBT|1|5|C|13
8QBT|1|5|A|14
8QBT|1|5|G|15
8QBT|1|5|C|16
8QBT|1|5|U|17
8QBT|1|5|U|18
8QBT|1|5|G|19
8QBT|1|5|G|20
8QBT|1|5|U|21
8QBT|1|5|A|22
8QBT|1|5|G|23
Current chains
- Chain 5
- Pro-tRNA
Nearby chains
- Chain 6
- Transfer RNA; tRNA
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: