HL_8QBT_008
3D structure
- PDB id
- 8QBT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli ApdP-stalled ribosomal complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- CUUUGCACG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8QBT_008 not in the Motif Atlas
- Homologous match to HL_5UD5_002
- Geometric discrepancy: 0.2682
- The information below is about HL_5UD5_002
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_87306.1
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
8QBT|1|7|C|31
8QBT|1|7|U|32
8QBT|1|7|U|33
8QBT|1|7|U|34
8QBT|1|7|G|35
8QBT|1|7|C|36
8QBT|1|7|A|37
8QBT|1|7|C|38
8QBT|1|7|G|39
Current chains
- Chain 7
- Ala-tRNA
Nearby chains
- Chain 4
- mRNA
- Chain 6
- Transfer RNA; tRNA
- Chain i
- Small subunit ribosomal RNA; SSU rRNA
- Chain o
- 30S ribosomal protein S7
- Chain s
- 30S ribosomal protein S11
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