HL_8QBT_069
3D structure
- PDB id
- 8QBT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli ApdP-stalled ribosomal complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- UGAAGUAG
- Length
- 8 nucleotides
- Bulged bases
- 8QBT|1|A|G|2529
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8QBT_069 not in the Motif Atlas
- Homologous match to HL_5J7L_194
- Geometric discrepancy: 0.0565
- The information below is about HL_5J7L_194
- Detailed Annotation
- GNRA variation
- Broad Annotation
- GNRA variation
- Motif group
- HL_31585.4
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 20
Unit IDs
8QBT|1|A|U|2528
8QBT|1|A|G|2529
8QBT|1|A|A|2530
8QBT|1|A|A|2531
8QBT|1|A|G|2532
8QBT|1|A|U|2533
8QBT|1|A|A|2534
8QBT|1|A|G|2535
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain G
- Large ribosomal subunit protein uL6
- Chain e
- Large ribosomal subunit protein bL36A
Coloring options: