HL_8QCQ_017
3D structure
- PDB id
- 8QCQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- B. subtilis ApdA-stalled ribosomal complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.3 Å
Loop
- Sequence
- CGUUAACG
- Length
- 8 nucleotides
- Bulged bases
- 8QCQ|1|A|U|591, 8QCQ|1|A|C|594
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8QCQ_017 not in the Motif Atlas
- Homologous match to HL_4WF9_017
- Geometric discrepancy: 0.1206
- The information below is about HL_4WF9_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50318.1
- Basepair signature
- cWW-cSH-F-F
- Number of instances in this motif group
- 1
Unit IDs
8QCQ|1|A|C|588
8QCQ|1|A|G|589
8QCQ|1|A|U|590
8QCQ|1|A|U|591
8QCQ|1|A|A|592
8QCQ|1|A|A|593
8QCQ|1|A|C|594
8QCQ|1|A|G|595
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain J
- 50S ribosomal protein L13
- Chain Q
- Large ribosomal subunit protein bL20
- Chain R
- 50S ribosomal protein L21
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