HL_8QCQ_035

3D structure

PDB id

8QCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

B. subtilis ApdA-stalled ribosomal complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.3 Å

Loop

Sequence

GUAUUGGAUAUC

Length

12 nucleotides

Bulged bases

8QCQ|1|A|U|1500, 8QCQ|1|A|U|1501, 8QCQ|1|A|U|1507

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8QCQ|1|A|G|1497
8QCQ|1|A|U|1498
8QCQ|1|A|A|1499
8QCQ|1|A|U|1500
8QCQ|1|A|U|1501
8QCQ|1|A|G|1502
8QCQ|1|A|G|1503
8QCQ|1|A|A|1504
8QCQ|1|A|U|1505
8QCQ|1|A|A|1506
8QCQ|1|A|U|1507
8QCQ|1|A|C|1508

Current chains

Chain A

23S rRNA

Nearby chains

Chain N

50S ribosomal protein L17