HL_8QCQ_059

3D structure

PDB id

8QCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

B. subtilis ApdA-stalled ribosomal complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.3 Å

Loop

Sequence

CGCAUGGAAG

Length

10 nucleotides

Bulged bases

8QCQ|1|A|C|2435

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8QCQ_059 not in the Motif Atlas

Homologous match to HL_7RQB_059

Geometric discrepancy: 0.0869

The information below is about HL_7RQB_059

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_40210.2

Basepair signature

cWW-tSH-F

Number of instances in this motif group

12

Unit IDs

8QCQ|1|A|C|2433
8QCQ|1|A|G|2434
8QCQ|1|A|C|2435
8QCQ|1|A|A|2436
8QCQ|1|A|U|2437
8QCQ|1|A|G|2438
8QCQ|1|A|G|2439
8QCQ|1|A|A|2440
8QCQ|1|A|A|2441
8QCQ|1|A|G|2442

Current chains

Chain A

23S rRNA

Nearby chains

Chain L

50S ribosomal protein L15