HL_8QCQ_102

3D structure

PDB id

8QCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

B. subtilis ApdA-stalled ribosomal complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.3 Å

Loop

Sequence

UUUUA

Length

5 nucleotides

Bulged bases

8QCQ|1|a|U|1462

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8QCQ_102 not in the Motif Atlas

Geometric match to HL_4YAZ_004

Geometric discrepancy: 0.2938

The information below is about HL_4YAZ_004

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_90436.3

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

8QCQ|1|a|U|1459
8QCQ|1|a|U|1460
8QCQ|1|a|U|1461
8QCQ|1|a|U|1462
8QCQ|1|a|A|1463

Current chains

Chain a

16S rRNA

Nearby chains