3D structure

PDB id
8QK7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E167K RF2 on E. coli 70S release complex with UAA
Experimental method
ELECTRON MICROSCOPY
Resolution
2.77 Å

Loop

Sequence
GGUCGGACAUC
Length
11 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_8QK7_054 not in the Motif Atlas
Homologous match to HL_5J7L_188
Geometric discrepancy: 0.0997
The information below is about HL_5J7L_188
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_11805.4
Basepair signature
cWW-F-F-F-F-F-F-F-F-F
Number of instances in this motif group
3

Unit IDs

8QK7|1|1|G|2303
8QK7|1|1|G|2304
8QK7|1|1|U|2305
8QK7|1|1|C|2306
8QK7|1|1|G|2307
8QK7|1|1|G|2308
8QK7|1|1|A|2309
8QK7|1|1|C|2310
8QK7|1|1|A|2311
8QK7|1|1|U|2312
8QK7|1|1|C|2313

Current chains

Chain 1
23S rRNA

Nearby chains

Chain E
Large ribosomal subunit protein uL5

Coloring options:


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