HL_8QK7_092

3D structure

PDB id

8QK7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E167K RF2 on E. coli 70S release complex with UAA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.77 Å

Loop

Sequence

GUUAAGUC

Length

8 nucleotides

Bulged bases

8QK7|1|2|G|1094

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8QK7_092 not in the Motif Atlas

Homologous match to HL_4LFB_025

Geometric discrepancy: 0.0831

The information below is about HL_4LFB_025

Detailed Annotation

T-loop related

Broad Annotation

T-loop

Motif group

HL_63894.2

Basepair signature

cWW-cWW-F-F-F

Number of instances in this motif group

19

Unit IDs

8QK7|1|2|G|1089
8QK7|1|2|U|1090
8QK7|1|2|U|1091
8QK7|1|2|A|1092
8QK7|1|2|A|1093
8QK7|1|2|G|1094
8QK7|1|2|U|1095
8QK7|1|2|C|1096

Current chains

Chain 2

16S rRNA

Nearby chains

Chain g

Small ribosomal subunit protein uS2

Chain l

Small ribosomal subunit protein uS7

Chain z

Small ribosomal subunit protein bS21