HL_8QPP_012

3D structure

PDB id

8QPP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CGAAUAG

Length

7 nucleotides

Bulged bases

8QPP|1|A|U|476

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8QPP_012 not in the Motif Atlas

Geometric match to HL_8C3A_039

Geometric discrepancy: 0.2709

The information below is about HL_8C3A_039

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

8QPP|1|A|C|472
8QPP|1|A|G|473
8QPP|1|A|A|474
8QPP|1|A|A|475
8QPP|1|A|U|476
8QPP|1|A|A|477
8QPP|1|A|G|478

Current chains

Chain A

16S rRNA (1533-MER)

Nearby chains