HL_8QPP_021

3D structure

PDB id

8QPP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GAAGCAACGC

Length

10 nucleotides

Bulged bases

8QPP|1|A|G|981

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8QPP_021 not in the Motif Atlas

Homologous match to HL_4LFB_021

Geometric discrepancy: 0.1596

The information below is about HL_4LFB_021

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_97521.2

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

6

Unit IDs

8QPP|1|A|G|973
8QPP|1|A|A|974
8QPP|1|A|A|975
8QPP|1|A|G|976
8QPP|1|A|C|977
8QPP|1|A|A|978
8QPP|1|A|A|979
8QPP|1|A|C|980
8QPP|1|A|G|981
8QPP|1|A|C|982

Current chains

Chain A

16S rRNA (1533-MER)

Nearby chains

Chain I

30S ribosomal protein S9

Chain J

30S ribosomal protein S10

Chain U

Transfer RNA; tRNA