HL_8QPP_028

3D structure

PDB id

8QPP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CGCGAG

Length

6 nucleotides

Bulged bases

8QPP|1|A|C|1276

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8QPP_028 not in the Motif Atlas

Homologous match to HL_5J7L_027

Geometric discrepancy: 0.3152

The information below is about HL_5J7L_027

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

8QPP|1|A|C|1274
8QPP|1|A|G|1275
8QPP|1|A|C|1276
8QPP|1|A|G|1277
8QPP|1|A|A|1278
8QPP|1|A|G|1279

Current chains

Chain A

16S rRNA (1533-MER)

Nearby chains

Chain M

30S ribosomal protein S13