HL_8QPP_053
3D structure
- PDB id
- 8QPP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bacillus subtilis MutS2-collided disome complex (stalled 70S)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- UUUUGUAGAA
- Length
- 10 nucleotides
- Bulged bases
- 8QPP|1|X|A|618
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8QPP_053 not in the Motif Atlas
- Geometric match to HL_4WF9_018
- Geometric discrepancy: 0.1328
- The information below is about HL_4WF9_018
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_33597.3
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 135
Unit IDs
8QPP|1|X|U|610
8QPP|1|X|U|611
8QPP|1|X|U|612
8QPP|1|X|U|613
8QPP|1|X|G|614
8QPP|1|X|U|615
8QPP|1|X|A|616
8QPP|1|X|G|617
8QPP|1|X|A|618
8QPP|1|X|A|619
Current chains
- Chain X
- 23S ribosomal RNA
Nearby chains
- Chain 0
- 50S ribosomal protein L32
- Chain a
- Large ribosomal subunit protein uL3
- Chain i
- 50S ribosomal protein L15
- Chain n
- Large ribosomal subunit protein bL20
- Chain o
- Large ribosomal subunit protein bL21
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