HL_8QPP_059

3D structure

PDB id

8QPP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UGAAAUG

Length

7 nucleotides

Bulged bases

8QPP|1|X|A|828, 8QPP|1|X|U|831

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8QPP_059 not in the Motif Atlas

Homologous match to HL_7A0S_023

Geometric discrepancy: 0.1356

The information below is about HL_7A0S_023

Detailed Annotation

UNCG variation

Broad Annotation

UNCG variation

Motif group

HL_51020.2

Basepair signature

cWW-cSW-F

Number of instances in this motif group

14

Unit IDs

8QPP|1|X|U|826
8QPP|1|X|G|827
8QPP|1|X|A|828
8QPP|1|X|A|829
8QPP|1|X|A|830
8QPP|1|X|U|831
8QPP|1|X|G|832

Current chains

Chain X

23S ribosomal RNA

Nearby chains

Chain Z

Large ribosomal subunit protein uL2