HL_8QPP_071

3D structure

PDB id

8QPP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GUUGAUAUUC

Length

10 nucleotides

Bulged bases

8QPP|1|X|U|1435, 8QPP|1|X|U|1436

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8QPP_071 not in the Motif Atlas

Homologous match to HL_4WF9_035

Geometric discrepancy: 0.1999

The information below is about HL_4WF9_035

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_77449.1

Basepair signature

cWW-tWH-F-F-F-F

Number of instances in this motif group

14

Unit IDs

8QPP|1|X|G|1428
8QPP|1|X|U|1429
8QPP|1|X|U|1430
8QPP|1|X|G|1431
8QPP|1|X|A|1432
8QPP|1|X|U|1433
8QPP|1|X|A|1434
8QPP|1|X|U|1435
8QPP|1|X|U|1436
8QPP|1|X|C|1437

Current chains

Chain X

23S ribosomal RNA

Nearby chains

Chain s

Large ribosomal subunit protein uL23