HL_8QRL_012
3D structure
- PDB id
- 8QRL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- mt-SSU assembly intermediate in GTPBP8 knock-out cells, state 2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.34 Å
Loop
- Sequence
- UAAAUCAACAAA
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8QRL|1|A|U|1115
8QRL|1|A|A|1116
8QRL|1|A|A|1117
8QRL|1|A|A|1118
8QRL|1|A|U|1119
8QRL|1|A|C|1120
8QRL|1|A|A|1121
8QRL|1|A|A|1122
8QRL|1|A|C|1123
8QRL|1|A|A|1124
8QRL|1|A|A|1125
8QRL|1|A|A|1126
Current chains
- Chain A
- 12S mitochondrial rRNA
Nearby chains
- Chain B
- 28S ribosomal protein S2, mitochondrial
- Chain D
- 28S ribosomal protein S5, mitochondrial
- Chain E
- 28S ribosomal protein S6, mitochondrial
- Chain S
- 28S ribosomal protein S23, mitochondrial
Coloring options: