HL_8QSJ_011
3D structure
- PDB id
- 8QSJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitoribosomal large subunit assembly intermediate 2 with GTPBP7
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- AACCCUCUAAAU
- Length
- 12 nucleotides
- Bulged bases
- 8QSJ|1|A|C|2070
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8QSJ_011 not in the Motif Atlas
- Geometric match to HL_8C3A_022
- Geometric discrepancy: 0.277
- The information below is about HL_8C3A_022
- Detailed Annotation
- Externally structured
- Broad Annotation
- Externally structured
- Motif group
- HL_96426.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 4
Unit IDs
8QSJ|1|A|A|2064
8QSJ|1|A|A|2065
8QSJ|1|A|C|2066
8QSJ|1|A|C|2067
8QSJ|1|A|C|2068
8QSJ|1|A|U|2069
8QSJ|1|A|C|2070
8QSJ|1|A|U|2071
8QSJ|1|A|A|2072
8QSJ|1|A|A|2073
8QSJ|1|A|A|2074
8QSJ|1|A|U|2075
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain 6
- 39S ribosomal protein L38, mitochondrial
- Chain N
- 39S ribosomal protein L16, mitochondrial
- Chain W
- 39S ribosomal protein L27, mitochondrial
- Chain Z
- 39S ribosomal protein L30, mitochondrial
- Chain f
- 39S ribosomal protein L48, mitochondrial
Coloring options: