HL_8QSJ_018
3D structure
- PDB id
- 8QSJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitoribosomal large subunit assembly intermediate 2 with GTPBP7
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GACACUGAAC
- Length
- 10 nucleotides
- Bulged bases
- 8QSJ|1|A|C|2359, 8QSJ|1|A|U|2360, 8QSJ|1|A|A|2363
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8QSJ_018 not in the Motif Atlas
- Geometric match to HL_8C3A_022
- Geometric discrepancy: 0.3066
- The information below is about HL_8C3A_022
- Detailed Annotation
- Externally structured
- Broad Annotation
- Externally structured
- Motif group
- HL_96426.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 4
Unit IDs
8QSJ|1|A|G|2349
8QSJ|1|A|A|2356
8QSJ|1|A|C|2357
8QSJ|1|A|A|2358
8QSJ|1|A|C|2359
8QSJ|1|A|U|2360
8QSJ|1|A|G|2361
8QSJ|1|A|A|2362
8QSJ|1|A|A|2363
8QSJ|1|A|C|2364
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain O
- 39S ribosomal protein L17, mitochondrial
- Chain T
- 39S ribosomal protein L22, mitochondrial
- Chain U
- 39S ribosomal protein L23, mitochondrial
- Chain d
- 39S ribosomal protein L45, mitochondrial
- Chain s
- 39S ribosomal protein S30, mitochondrial
Coloring options: