HL_8QSJ_038
3D structure
- PDB id
- 8QSJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitoribosomal large subunit assembly intermediate 2 with GTPBP7
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UUAACACAAA
- Length
- 10 nucleotides
- Bulged bases
- 8QSJ|1|B|U|1614
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8QSJ_038 not in the Motif Atlas
- Geometric match to HL_5B63_003
- Geometric discrepancy: 0.218
- The information below is about HL_5B63_003
- Detailed Annotation
- tRNA D-loop
- Broad Annotation
- No text annotation
- Motif group
- HL_65478.1
- Basepair signature
- cWW-cWS-F
- Number of instances in this motif group
- 4
Unit IDs
8QSJ|1|B|U|1613
8QSJ|1|B|U|1614
8QSJ|1|B|A|1615
8QSJ|1|B|A|1616
8QSJ|1|B|C|1617
8QSJ|1|B|A|1618
8QSJ|1|B|C|1619
8QSJ|1|B|A|1620
8QSJ|1|B|A|1621
8QSJ|1|B|A|1622
Current chains
- Chain B
- tRNA-Val
Nearby chains
- Chain 6
- 39S ribosomal protein L38, mitochondrial
- Chain P
- 39S ribosomal protein L18, mitochondrial
Coloring options: