HL_8QYX_003
3D structure
- PDB id
- 8QYX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human 60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.78 Å
Loop
- Sequence
- CGGCGAG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8QYX_003 not in the Motif Atlas
- Homologous match to HL_8C3A_003
- Geometric discrepancy: 0.0856
- The information below is about HL_8C3A_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_67216.9
- Basepair signature
- cWW-cWW-F-tSH
- Number of instances in this motif group
- 9
Unit IDs
8QYX|1|A2|C|89
8QYX|1|A2|G|90
8QYX|1|A2|G|91
8QYX|1|A2|C|92
8QYX|1|A2|G|93
8QYX|1|A2|A|94
8QYX|1|A2|G|95
Current chains
- Chain A2
- 28S rRNA
Nearby chains
- Chain F1
- 60S ribosomal protein L13
- Chain K1
- 60S ribosomal protein L18
- Chain U1
- Large ribosomal subunit protein uL15
- Chain i1
- 60S ribosomal protein L36a
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