HL_8QYX_011
3D structure
- PDB id
- 8QYX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human 60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.78 Å
Loop
- Sequence
- UGAAG(A2M)
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: A2M
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8QYX_011 not in the Motif Atlas
- Homologous match to HL_8C3A_011
- Geometric discrepancy: 0.1141
- The information below is about HL_8C3A_011
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.2
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 360
Unit IDs
8QYX|1|A2|U|393
8QYX|1|A2|G|394
8QYX|1|A2|A|395
8QYX|1|A2|A|396
8QYX|1|A2|G|397
8QYX|1|A2|A2M|398
Current chains
- Chain A2
- 28S rRNA
Nearby chains
- Chain J1
- 60S ribosomal protein L17
Coloring options: