HL_8QYX_013

3D structure

PDB id

8QYX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 60S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

1.78 Å

Loop

Sequence

CCCCCGAAGAGGGGG

Length

15 nucleotides

Bulged bases

8QYX|1|A2|C|1251, 8QYX|1|A2|A|1254, 8QYX|1|A2|A|1255, 8QYX|1|A2|G|1256

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8QYX|1|A2|C|1248
8QYX|1|A2|C|1249
8QYX|1|A2|C|1250
8QYX|1|A2|C|1251
8QYX|1|A2|C|1252
8QYX|1|A2|G|1253
8QYX|1|A2|A|1254
8QYX|1|A2|A|1255
8QYX|1|A2|G|1256
8QYX|1|A2|A|1257
8QYX|1|A2|G|1258
8QYX|1|A2|G|1259
8QYX|1|A2|G|1260
8QYX|1|A2|G|1261
8QYX|1|A2|G|1262

Current chains

Chain A2

28S rRNA

Nearby chains

Chain V1

60S ribosomal protein L29