HL_8QYX_017

3D structure

PDB id

8QYX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 60S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

1.78 Å

Loop

Sequence

CGCGCUCG

Length

8 nucleotides

Bulged bases

8QYX|1|A2|G|1408, 8QYX|1|A2|U|1410, 8QYX|1|A2|C|1411

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8QYX|1|A2|C|1405
8QYX|1|A2|G|1406
8QYX|1|A2|C|1407
8QYX|1|A2|G|1408
8QYX|1|A2|C|1409
8QYX|1|A2|U|1410
8QYX|1|A2|C|1411
8QYX|1|A2|G|1412

Current chains

Chain A2

28S rRNA

Nearby chains

Chain U1

Large ribosomal subunit protein uL15

Chain V1

60S ribosomal protein L29