HL_8QYX_035

3D structure

PDB id

8QYX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 60S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

1.78 Å

Loop

Sequence

CGAUGGCCUCCGUUG

Length

15 nucleotides

Bulged bases

8QYX|1|A2|C|2488, 8QYX|1|A2|U|2490

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8QYX|1|A2|C|2482
8QYX|1|A2|G|2483
8QYX|1|A2|A|2484
8QYX|1|A2|U|2485
8QYX|1|A2|G|2486
8QYX|1|A2|G|2487
8QYX|1|A2|C|2488
8QYX|1|A2|C|2489
8QYX|1|A2|U|2490
8QYX|1|A2|C|2491
8QYX|1|A2|C|2492
8QYX|1|A2|G|2493
8QYX|1|A2|U|2494
8QYX|1|A2|U|2495
8QYX|1|A2|G|2496

Current chains

Chain A2

28S rRNA

Nearby chains

Chain C2

5.8S ribosomal RNA; 5.8S rRNA

Chain R1

60S ribosomal protein L23a