HL_8QYX_076
3D structure
- PDB id
- 8QYX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human 60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.78 Å
Loop
- Sequence
- CACUUG
- Length
- 6 nucleotides
- Bulged bases
- 8QYX|1|C2|U|111
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8QYX_076 not in the Motif Atlas
- Homologous match to HL_8P9A_188
- Geometric discrepancy: 0.1468
- The information below is about HL_8P9A_188
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_13184.1
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
8QYX|1|C2|C|107
8QYX|1|C2|A|108
8QYX|1|C2|C|109
8QYX|1|C2|U|110
8QYX|1|C2|U|111
8QYX|1|C2|G|112
Current chains
- Chain C2
- 5.8S rRNA
Nearby chains
- Chain A2
- Large subunit ribosomal RNA; LSU rRNA
- Chain R1
- 60S ribosomal protein L23a
- Chain d1
- 60S ribosomal protein L37
- Chain f1
- 60S ribosomal protein L39
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