HL_8QYX_077

3D structure

PDB id

8QYX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 60S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

1.78 Å

Loop

Sequence

GGUUCCUCC

Length

9 nucleotides

Bulged bases

8QYX|1|C2|U|124

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8QYX|1|C2|G|121
8QYX|1|C2|G|122
8QYX|1|C2|U|123
8QYX|1|C2|U|124
8QYX|1|C2|C|125
8QYX|1|C2|C|126
8QYX|1|C2|U|127
8QYX|1|C2|C|128
8QYX|1|C2|C|129

Current chains

Chain C2

5.8S rRNA

Nearby chains

Chain A2

Large subunit ribosomal RNA; LSU rRNA

Chain R1

60S ribosomal protein L23a