HL_8R3V_014

3D structure

PDB id

8R3V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (non-rotated disome interface)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.28 Å

Loop

Sequence

GGACCAUC

Length

8 nucleotides

Bulged bases

8R3V|1|72|G|411

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8R3V_014 not in the Motif Atlas

Homologous match to HL_5J7L_146

Geometric discrepancy: 0.064

The information below is about HL_5J7L_146

Detailed Annotation

Pseudoknot geometry

Broad Annotation

No text annotation

Motif group

HL_30680.3

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

15

Unit IDs

8R3V|1|72|G|410
8R3V|1|72|G|411
8R3V|1|72|A|412
8R3V|1|72|C|413
8R3V|1|72|C|414
8R3V|1|72|A|415
8R3V|1|72|U|416
8R3V|1|72|C|417

Current chains

Chain 72

23S ribosomal RNA

Nearby chains