HL_8R3V_080

3D structure

PDB id

8R3V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (non-rotated disome interface)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.28 Å

Loop

Sequence

AACUGAGACACGGU

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8R3V_080 not in the Motif Atlas

Homologous match to HL_6CZR_079

Geometric discrepancy: 0.1696

The information below is about HL_6CZR_079

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81205.2

Basepair signature

cWW-cWW-tWH-F-tWH-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

8R3V|1|A1|A|320
8R3V|1|A1|A|321
8R3V|1|A1|C|322
8R3V|1|A1|U|323
8R3V|1|A1|G|324
8R3V|1|A1|A|325
8R3V|1|A1|G|326
8R3V|1|A1|A|327
8R3V|1|A1|C|328
8R3V|1|A1|A|329
8R3V|1|A1|C|330
8R3V|1|A1|G|331
8R3V|1|A1|G|332
8R3V|1|A1|U|333

Current chains

Chain A1

16S ribosomal RNA

Nearby chains

Chain P1

30S ribosomal protein S16

Chain T1

Small ribosomal subunit protein bS20